CDS

Accession Number TCMCG027C22453
gbkey CDS
Protein Id XP_018832964.1
Location join(8635652..8635663,8635765..8635851,8635969..8636175,8636269..8636475,8636621..8636671,8638893..8638985,8643029..8643169,8643246..8643326,8643469..8643716,8643811..8643982,8645222..8645337,8645482..8645539,8645729..8645794,8645921..8646133,8646286..8646337,8646419..8646792,8646933..8647027,8648259..8648510,8648924..8649561,8649919..8650122,8650575..8650750)
Gene LOC109000516
GeneID 109000516
Organism Juglans regia

Protein

Length 1180aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA350852
db_source XM_018977419.2
Definition tetratricopeptide repeat protein SKI3 isoform X1 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category A
Description Tetratricopeptide repeat protein
KEGG_TC -
KEGG_Module M00392        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12600        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035327        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAGAATCGGAAGAAGAAAGCGAAGAAGCTGTTCAGAGACGGTTGGAGGAGTCAGTGAATGCGTCTCCCGATGATCCCTCTCTTCATTTTGAACTTGGACTCTTGTTGTGGGAGAAAGAGGGAGAATCCGAGAAGGAGAAGGCGGCGGAGCACTTCGTGATATCGGCCAAACTAAACCCTCAAAACGCTGCGGCTTTCAGATTTCTTGGCCATTACTACGCCCATTTCTCCGTTGATGCCAAGCGGGCTCTCAAGTGTTATCAGAGAGCTGTCTCCCTAAACCCCGATGATTCACATTCCGGAGAGTCTTTGTGTGATTTATTGGACAATGAAGGAAAGGAGAGTTTGGAGGTGTCTGTGTGCAGAGACGCTTCAGAAAAGTCGCCTAAGGCTTTCTGGGCGTTTCGGAGACTGGGTTACGTGCAGCTTCATCAAAACAAATGGTCTGAAGCTGTACTGTGCCTTCAATATGCTATTCGGGGTTATCCTACCAGTGCTGATTTATGGCAAGCTCTGGGTCTTGCCTACCAGCGCTTGGGAAGGTTTACCGCTGCTATTAAGTCTTATGAGCGAGCCATTGAATTGGACAATACAAATGTGTTTGCATTGGTTGAAAGTGGAAACATATTTTTGACGCTTAGTTCCTTTAAAAAGGGAGTTGAGCAGTTTCGGCAAGCTCTAGAGATTTCACCTCAGAGTGTGTCTGCACAATATGGGCTTGCATCTGGTCTACTTGGTTTGGCAAAGGAATGTGTTAACTTAGGGGCATTCAGATGGGGAGCTTCGTTATTAGAGGAGGCATCTGCTGTTGCAATAGCAAGTACTCATTTGGCTGGAAATATATCATGTATTTGGAAGTTGCATGGTGATATTCAGCTTGCATATGCCAAGTGTTTTCCCTGGACACAGGAAAGCCAGGGTTTAGAACTTGATGCGGAAGCCTTTAACACTTCCATCCTTTCCTGGACGCGGACTTGCTGTTTAGCTGCCGGATCTGCAAAATGTTCTTATCAGCGGGCTCTGCACCTGGCCCCATGGCAACCTAACATTTATTCTGATATTGCAATAACTGCAGATCTGATATTGTCTTTGGACAAGTGTTCTGGGAGCAACTTAACTGCTTGGAAACTGTCTGAGAAGATGGCTTTGGGGGCCTTGTTACTTGAGGGTGACAATTGTGAGTTTTGGGTGGCCTTGGGATGTCTGTCTGGCCATAATGCATTGAAACAACATGCCTTTATCAGGGGATTGCAATTGGATGTTTCTCTAGCTATGGGTTGGGCATACTTGGGGAAGTTTTATCGGAAAGAGGGTGCAAACCAATTGGCAAAACAAGCATTTGATTGTGCTAGAAGTATAAATCCTTCGCTTTCATTACCATGGGCAGGCATGGCAGCTGATTTTCATGCTAGGGGTCTTGCACCAGATGAGGCTTTTGAGGGCTGCTTAAGAGCTGTGCAGACATTTCCTCTTGCACAGTTCCAAATTGGTCTTGCAAAGCTTTCTCTGTTGTCAGGACATCTCTCATCTTCACAGGTTTTTGGAGCTATCAAGCAGGCTGTGCAGCATGCACCTCACTTTCCTGAATCACATAATTTACATGGGCTGGCTTGTGAGGCACGATTTGATTATCAATCTGCTGCTGCTGCTTATCGGTTGGCATGCTGTGCAATCAGCAGTGTTTCAGCTATTGTCCCAAATTCTCATGCCAGAGATATATCACTTAATTTGGCAAGATCTCTGTGTAAGGCAGGGAATGCTCAAGATGCTTTGCTGGAATGTGAGAATTTGAAGAAAGAAGGTTTGCTTGACACGGAGGGTTTGCAAATATATGCTCTCTCTTTATGGCAACTTGGCAAATTTGACTTGGCCCTTTCCGTGGTGAGAAGTCTGGCAGTGAGTATTTCTACCATGAAACAGACATCTGTGGCCGCCCCAGTTGGTTTCATATGTAGAATGCTATATTTCATGTCTGGAGTGGATTCAGTAATCAGTAATATCCTGGAAATGCCAAAGGAACTCTTTCAGAATTCAGGAATTAGTTTTATAGTGTCTGCTATTAATGCTCTTGATCAAATGAATCGGCTAGAGTCAGTTGTTTCAAGCAGCCGATCAGTTCTTAGATCTCATGAAGAGATCACTGGAATGCACTTTTTGATAGCACTTGGTAAACTCATCAGACATGGGACAGAGTTCTGTCTTGGATTTCAGAGTGGAGTTGCTCATCTTAAAAAATGTCTTCACAAGATCCCTAACAGTATTTTGTTGAGGAACCTGCTTGGTTATCTTCTGCTCTCTAGTACGGATTGGAATGATAGTCATCTTGCAACTAGGTGCTGCAATGTAGATGCCCCAGACCTTGATTTTGACCTTCCAAATCAAGGTTTAAAATCAGCAAGTGAAATCCTGGGTGCCGGAGCAGTTGCTTGTTATGCGATAGGCAATAAGAATCCAAAGTTTTCTTTTCCAACATGTACATACCACTGCATGAATGAACCTGGAGCTATTCAACAGCTGCAAAAATGCTTCCATCGAGAACCCTGGAATCCTAATTTTCGGTACTTGCTTGTACTCAATCTTCTACAAAAGGCACGCGAAGAGAGATTTCCTCATCATCTCTGTGTTATACTTGAACGGCTAATATCTGTGGCACTTTCCAGTGGACTGTACTCAAAGACAGACATGTCTTATAGAAACTACCAGCTTTTACTCTGTGCTTCTGAGATCAGCCTGCAAATTGGGAATAAAATTAGCTGCATCAACCATGCCAAAACTGCTTCAGTACTTTTGCTTCCTGATGCATATCTATTCTTTTCACACTTACAATTGTGTCGTGCCTACGCTGCTGAAGGTGATATTAGAAATCTTCAGAAAGAGTATACAAGATGCTTGGAACTCAAGACCAATTATCAGATTGGTTGGATATGTCTGAAATTTATTGAATCACGATATGATATGGAAACTGATTCAAACATTTTAGAACTGAGCTTCAGAGATTCCTCAAAAGAGAGGAATTATTCGTGGAATATGTGGATGGCCATATTTAATATGGTGTGGGGTCTGATTTCTATATGGAACCAGGATTTCCTTTCTGCAGAAGAGTTTCTTGACCAAGCTTGTTCTTTGGTTGGTACTGAGAGCTGCTTTGTTTTCTGTCATGGTGCTACCTGCATGGAACTTGCCAGGCAGTTGTGTGGTTCACAGTTCCTATCGCTTGCTATTAAGAGTCTCACTAAAGCTCAAGAAGCCTCTCTCGTTCCTCTGCCAATTGTCTCACTATTGCTGGCTCAGGCAGAGGGAAGCCTTGGTTCTAAAGAAAAGTGGGAGAGAAACCTCCGTCTTGAGTGGTTTTCTTGGCCACCAGAAATGAGGCCCGCAGAACTCTTCTTTCAAATGCATCTGCTTGCAAGACAATCTAAATCAGCACCGAACTCTACATCCAACATTGAGTTCTGTCAGAGTCCAGAGAGATGGGTACTCCGAGCAATTCATACCAACCCTTCTTGTGTAAGATATTGGAAGGTTTTGCAGAAATTTTAG
Protein:  
MGESEEESEEAVQRRLEESVNASPDDPSLHFELGLLLWEKEGESEKEKAAEHFVISAKLNPQNAAAFRFLGHYYAHFSVDAKRALKCYQRAVSLNPDDSHSGESLCDLLDNEGKESLEVSVCRDASEKSPKAFWAFRRLGYVQLHQNKWSEAVLCLQYAIRGYPTSADLWQALGLAYQRLGRFTAAIKSYERAIELDNTNVFALVESGNIFLTLSSFKKGVEQFRQALEISPQSVSAQYGLASGLLGLAKECVNLGAFRWGASLLEEASAVAIASTHLAGNISCIWKLHGDIQLAYAKCFPWTQESQGLELDAEAFNTSILSWTRTCCLAAGSAKCSYQRALHLAPWQPNIYSDIAITADLILSLDKCSGSNLTAWKLSEKMALGALLLEGDNCEFWVALGCLSGHNALKQHAFIRGLQLDVSLAMGWAYLGKFYRKEGANQLAKQAFDCARSINPSLSLPWAGMAADFHARGLAPDEAFEGCLRAVQTFPLAQFQIGLAKLSLLSGHLSSSQVFGAIKQAVQHAPHFPESHNLHGLACEARFDYQSAAAAYRLACCAISSVSAIVPNSHARDISLNLARSLCKAGNAQDALLECENLKKEGLLDTEGLQIYALSLWQLGKFDLALSVVRSLAVSISTMKQTSVAAPVGFICRMLYFMSGVDSVISNILEMPKELFQNSGISFIVSAINALDQMNRLESVVSSSRSVLRSHEEITGMHFLIALGKLIRHGTEFCLGFQSGVAHLKKCLHKIPNSILLRNLLGYLLLSSTDWNDSHLATRCCNVDAPDLDFDLPNQGLKSASEILGAGAVACYAIGNKNPKFSFPTCTYHCMNEPGAIQQLQKCFHREPWNPNFRYLLVLNLLQKAREERFPHHLCVILERLISVALSSGLYSKTDMSYRNYQLLLCASEISLQIGNKISCINHAKTASVLLLPDAYLFFSHLQLCRAYAAEGDIRNLQKEYTRCLELKTNYQIGWICLKFIESRYDMETDSNILELSFRDSSKERNYSWNMWMAIFNMVWGLISIWNQDFLSAEEFLDQACSLVGTESCFVFCHGATCMELARQLCGSQFLSLAIKSLTKAQEASLVPLPIVSLLLAQAEGSLGSKEKWERNLRLEWFSWPPEMRPAELFFQMHLLARQSKSAPNSTSNIEFCQSPERWVLRAIHTNPSCVRYWKVLQKF